| skani computes average nucleotide identity for metagenomics. |
| SlowMoMan allows discovery and visualization of paths in low-dimensional embeddings. |
| flopp is a fast polyploid haplotype phaser for long reads. |
| HyperMinHash is a compression of MinHash sketches in double logarithmic space. |
| Carnelian is a pipeline for alignment-free functional binning and abundance estimation using metagenomic reads. |
| OPAL is a metagenomic NGS read classifier, based on SVMs and spaced seeds. |
| CORA accelerates NGS read mapping. |
| LAVA is an NGS-based computational SNP array. |
| esFragBag accelerates protein similarity search (FragBag). |
| MICA accelerates metagenomic search (BLASTX and DIAMOND). |
| Ammolite accelerates small-molecule search. |
| Quartz is a lossy-quality NGS quality score compressor. |